clip3 protein (Hippocampus comes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

clip3

CAP-GLY domain containing linker protein 3. (610 aa)

Predicted Functional Partners:

cyld

0.533

LOC109521498

0.533

LOC109516522

0.503

LOC109515323

0.461

ripk1

0.461

bub3

0.458

LOC109524245

0.445

rps27a

0.424

ckap5

0.423

dctn2

0.422

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109515323	LOC109516522	ENSHCOP00000014336	ENSHCOP00000001527	Tumor necrosis factor receptor superfamily, member 1a.	Uncharacterized protein.	0.934
LOC109515323	LOC109521498	ENSHCOP00000014336	ENSHCOP00000002314	Tumor necrosis factor receptor superfamily, member 1a.	Cylindromatosis (turban tumor syndrome), b.	0.954
LOC109515323	LOC109524245	ENSHCOP00000014336	ENSHCOP00000002682	Tumor necrosis factor receptor superfamily, member 1a.	X-linked inhibitor of apoptosis.	0.852
LOC109515323	clip3	ENSHCOP00000014336	ENSHCOP00000019546	Tumor necrosis factor receptor superfamily, member 1a.	CAP-GLY domain containing linker protein 3.	0.461
LOC109515323	cyld	ENSHCOP00000014336	ENSHCOP00000000209	Tumor necrosis factor receptor superfamily, member 1a.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.954
LOC109515323	ripk1	ENSHCOP00000014336	ENSHCOP00000028031	Tumor necrosis factor receptor superfamily, member 1a.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.979
LOC109515323	rps27a	ENSHCOP00000014336	ENSHCOP00000016034	Tumor necrosis factor receptor superfamily, member 1a.	Ribosomal protein S27a.	0.570
LOC109516522	LOC109515323	ENSHCOP00000001527	ENSHCOP00000014336	Uncharacterized protein.	Tumor necrosis factor receptor superfamily, member 1a.	0.934
LOC109516522	LOC109521498	ENSHCOP00000001527	ENSHCOP00000002314	Uncharacterized protein.	Cylindromatosis (turban tumor syndrome), b.	0.908
LOC109516522	LOC109524245	ENSHCOP00000001527	ENSHCOP00000002682	Uncharacterized protein.	X-linked inhibitor of apoptosis.	0.539
LOC109516522	clip3	ENSHCOP00000001527	ENSHCOP00000019546	Uncharacterized protein.	CAP-GLY domain containing linker protein 3.	0.503
LOC109516522	ripk1	ENSHCOP00000001527	ENSHCOP00000028031	Uncharacterized protein.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.980
LOC109516522	rps27a	ENSHCOP00000001527	ENSHCOP00000016034	Uncharacterized protein.	Ribosomal protein S27a.	0.903
LOC109521498	LOC109515323	ENSHCOP00000002314	ENSHCOP00000014336	Cylindromatosis (turban tumor syndrome), b.	Tumor necrosis factor receptor superfamily, member 1a.	0.954
LOC109521498	LOC109516522	ENSHCOP00000002314	ENSHCOP00000001527	Cylindromatosis (turban tumor syndrome), b.	Uncharacterized protein.	0.908
LOC109521498	LOC109524245	ENSHCOP00000002314	ENSHCOP00000002682	Cylindromatosis (turban tumor syndrome), b.	X-linked inhibitor of apoptosis.	0.567
LOC109521498	clip3	ENSHCOP00000002314	ENSHCOP00000019546	Cylindromatosis (turban tumor syndrome), b.	CAP-GLY domain containing linker protein 3.	0.533
LOC109521498	ripk1	ENSHCOP00000002314	ENSHCOP00000028031	Cylindromatosis (turban tumor syndrome), b.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.980
LOC109521498	rps27a	ENSHCOP00000002314	ENSHCOP00000016034	Cylindromatosis (turban tumor syndrome), b.	Ribosomal protein S27a.	0.924
LOC109524245	LOC109515323	ENSHCOP00000002682	ENSHCOP00000014336	X-linked inhibitor of apoptosis.	Tumor necrosis factor receptor superfamily, member 1a.	0.852