STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csrp3Cysteine and glycine-rich protein 3 (cardiac LIM protein). (192 aa)    
Predicted Functional Partners:
smpx
Small muscle protein X-linked.
   
  
 0.758
tcap
Titin-cap (telethonin).
   
 
 0.711
ENSHCOP00000006892
Uncharacterized protein.
   
  
 0.692
ENSHCOP00000011765
Uncharacterized protein.
   
  
 0.692
ENSHCOP00000011770
Uncharacterized protein.
   
  
 0.692
myoz2
Myozenin 2b.
   
  
 0.692
LOC109527129
Xin actin binding repeat containing 2b.
   
 
 0.666
LOC109515008
Xin actin binding repeat containing 2a.
   
 
 0.666
mb
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
   
  
 0.635
ENSHCOP00000028290
Nebulin-related anchoring protein.
   
 
 0.621
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.