STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSHCOP00000019637Inter-alpha-trypsin inhibitor heavy chain 5. (836 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.547
ENSHCOP00000021505
Inter-alpha-trypsin inhibitor heavy chain family member 6.
 
 
0.545
prelp
Proline/arginine-rich end leucine-rich repeat protein.
   
  0.530
ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.528
itih2
Inter-alpha-trypsin inhibitor heavy chain 2.
 
 
0.526
vtn
Vitronectin a.
   
 0.513
LOC109532034
Vitronectin b.
   
 0.513
ENSHCOP00000011817
Im:7152348.
    
 0.478
ENSHCOP00000013401
Uncharacterized protein.
   
 0.477
ENSHCOP00000012679
Uncharacterized protein.
   
 0.465
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.