STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM19Transmembrane protein 19. (343 aa)    
Predicted Functional Partners:
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.590
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.590
slc30a5
Solute carrier family 30 member 5.
   
  
 0.584
ano9
Anoctamin.
      
 0.548
def6
DEF6 guanine nucleotide exchange factor a.
      
 0.545
ENSHCOP00000013158
Scavenger receptor class F, member 1.
      
 0.518
rab21
RAB21, member RAS oncogene family.
 
    
 0.486
saal1
Serum amyloid A-like 1.
      
 0.483
ENSHCOP00000027939
Secretion regulating guanine nucleotide exchange factor.
      
 0.483
LOC109523927
RUN domain containing 3Ab.
      
 0.471
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.