STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd7Coiled-coil-helix-coiled-coil-helix domain containing 7. (87 aa)    
Predicted Functional Partners:
LOC109522450
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.665
LOC109518612
Cytochrome c oxidase assembly homolog 11 (yeast).
   
  
 0.644
LOC109530604
Cytochrome C oxidase assembly factor 5.
   
  
 0.613
cmc2
COX assembly mitochondrial protein.
   
 
 0.600
ppp2r2d
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
      
 0.571
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.571
LOC109512700
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.566
impad1
Inositol monophosphatase domain containing 1.
      
 0.516
LOC109528927
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
  
 0.485
RPS20
Ribosomal protein S20.
   
  
 0.477
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.