Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109517598 | LOC109517695 | ENSHCOP00000010128 | ENSHCOP00000019935 | Uncharacterized protein. | GRAM domain-containing protein. | 0.403 |
LOC109517695 | LOC109517598 | ENSHCOP00000019935 | ENSHCOP00000010128 | GRAM domain-containing protein. | Uncharacterized protein. | 0.403 |
LOC109517695 | MPZL2 | ENSHCOP00000019935 | ENSHCOP00000011078 | GRAM domain-containing protein. | Myelin protein zero like 2. | 0.516 |
LOC109517695 | Scn2b | ENSHCOP00000019935 | ENSHCOP00000013823 | GRAM domain-containing protein. | Sodium channel, voltage-gated, type II, beta. | 0.516 |
LOC109517695 | gramd1c | ENSHCOP00000019935 | ENSHCOP00000014835 | GRAM domain-containing protein. | GRAM domain containing 1c. | 0.425 |
MPZL2 | LOC109517695 | ENSHCOP00000011078 | ENSHCOP00000019935 | Myelin protein zero like 2. | GRAM domain-containing protein. | 0.516 |
MPZL2 | gramd1c | ENSHCOP00000011078 | ENSHCOP00000014835 | Myelin protein zero like 2. | GRAM domain containing 1c. | 0.516 |
Scn2b | LOC109517695 | ENSHCOP00000013823 | ENSHCOP00000019935 | Sodium channel, voltage-gated, type II, beta. | GRAM domain-containing protein. | 0.516 |
Scn2b | gramd1c | ENSHCOP00000013823 | ENSHCOP00000014835 | Sodium channel, voltage-gated, type II, beta. | GRAM domain containing 1c. | 0.516 |
gramd1c | LOC109517695 | ENSHCOP00000014835 | ENSHCOP00000019935 | GRAM domain containing 1c. | GRAM domain-containing protein. | 0.425 |
gramd1c | MPZL2 | ENSHCOP00000014835 | ENSHCOP00000011078 | GRAM domain containing 1c. | Myelin protein zero like 2. | 0.516 |
gramd1c | Scn2b | ENSHCOP00000014835 | ENSHCOP00000013823 | GRAM domain containing 1c. | Sodium channel, voltage-gated, type II, beta. | 0.516 |