STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr0b2Nuclear receptor subfamily 0, group B, member 2a. (255 aa)    
Predicted Functional Partners:
nr5a1
Nuclear receptor subfamily 5, group A, member 1a.
   
0.897
nr5a2
Nuclear receptor subfamily 5, group A, member 2.
   
0.897
LOC109517508
cAMP responsive element binding protein 3-like 3 like.
      
 0.689
hnf4a
Hepatocyte nuclear factor 4, alpha.
   
0.687
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 
0.687
LOC109515575
Hepatocyte nuclear factor 4, gamma.
   
0.687
LOC109517754
Nuclear receptor subfamily 1, group H, member 5.
   
 
 0.687
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.668
PPARA
Peroxisome proliferator-activated receptor alpha b.
   
 0.667
LOC109523728
Peroxisome proliferator-activated receptor alpha a.
   
 0.667
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.