STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (249 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
   
 0.936
auts2
Activator of transcription and developmental regulator AUTS2 a.
    
 0.904
cpsf4
Cleavage and polyadenylation specific factor 4.
 
      0.797
LOC109526496
Fibrosin.
    
 0.774
csnk2b
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.772
YAF2
YY1 associated factor 2.
    
 0.768
LOC109523715
YY1 associated factor 2.
    
 0.768
rybp
RING1 and YY1 binding protein b.
    
 0.768
LOC109521726
Lysine (K)-specific demethylase 2Aa.
   
 0.674
LOC109511586
Lysine (K)-specific demethylase 2Ba.
   
 0.674
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.