STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxcl14Chemokine (C-X-C motif) ligand 14. (99 aa)    
Predicted Functional Partners:
LOC109512727
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
  
 
 0.928
LOC109519922
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
   
 
 0.913
LOC109508383
Chemokine (C-X-C motif) ligand 19.
    
 
 0.899
LOC109506990
C-C motif chemokine.
    
 
 0.829
LOC109519803
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 
 0.801
nrp1
Neuropilin; Belongs to the neuropilin family.
      
 0.562
ENSHCOP00000006922
SCY domain-containing protein.
    
 
 0.516
LOC109512797
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.498
cxcr4
C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.498
ENSHCOP00000013527
SCY domain-containing protein.
    
 
 0.476
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.