STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnrc18Trinucleotide repeat containing 18. (2181 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.811
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
    
 
 0.655
ncaph2
Non-SMC condensin II complex, subunit H2.
      
 0.618
Mterf2
Mitochondrial transcription termination factor 2.
   
    0.587
MTERF1
Mitochondrial transcription termination factor 1.
   
    0.587
mrpl54
Mitochondrial ribosomal protein L54.
      
 0.572
LOC109523313
RAN binding protein 2.
    
 0.564
sinhcaf
SIN3-HDAC complex associated factor.
    
 
 0.545
ENSHCOP00000023803
Uncharacterized protein.
   
 0.521
rbbp5
Retinoblastoma binding protein 5.
    
 0.500
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.