Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSHCOP00000005461 | pknox2 | ENSHCOP00000005461 | ENSHCOP00000021080 | Mothers against decapentaplegic homolog. | Pbx/knotted 1 homeobox 2. | 0.414 |
ENSHCOP00000016330 | LOC109508573 | ENSHCOP00000016330 | ENSHCOP00000006434 | Uncharacterized protein. | Homeobox B1a. | 0.694 |
ENSHCOP00000016330 | hoxb1 | ENSHCOP00000016330 | ENSHCOP00000018890 | Uncharacterized protein. | Homeobox B1b. | 0.694 |
ENSHCOP00000016330 | pknox2 | ENSHCOP00000016330 | ENSHCOP00000021080 | Uncharacterized protein. | Pbx/knotted 1 homeobox 2. | 0.588 |
LOC109508573 | ENSHCOP00000016330 | ENSHCOP00000006434 | ENSHCOP00000016330 | Homeobox B1a. | Uncharacterized protein. | 0.694 |
LOC109508573 | LOC109510097 | ENSHCOP00000006434 | ENSHCOP00000024805 | Homeobox B1a. | Pre-B-cell leukemia transcription factor 4. | 0.694 |
LOC109508573 | LOC109512200 | ENSHCOP00000006434 | ENSHCOP00000008202 | Homeobox B1a. | Pre-B-cell leukemia homeobox 2. | 0.710 |
LOC109508573 | LOC109521169 | ENSHCOP00000006434 | ENSHCOP00000002769 | Homeobox B1a. | Pre-B-cell leukemia homeobox 1b. | 0.694 |
LOC109508573 | pbx3 | ENSHCOP00000006434 | ENSHCOP00000011976 | Homeobox B1a. | Homeobox domain-containing protein. | 0.694 |
LOC109508573 | pknox2 | ENSHCOP00000006434 | ENSHCOP00000021080 | Homeobox B1a. | Pbx/knotted 1 homeobox 2. | 0.547 |
LOC109510097 | LOC109508573 | ENSHCOP00000024805 | ENSHCOP00000006434 | Pre-B-cell leukemia transcription factor 4. | Homeobox B1a. | 0.694 |
LOC109510097 | hoxb1 | ENSHCOP00000024805 | ENSHCOP00000018890 | Pre-B-cell leukemia transcription factor 4. | Homeobox B1b. | 0.696 |
LOC109510097 | pknox2 | ENSHCOP00000024805 | ENSHCOP00000021080 | Pre-B-cell leukemia transcription factor 4. | Pbx/knotted 1 homeobox 2. | 0.588 |
LOC109512200 | LOC109508573 | ENSHCOP00000008202 | ENSHCOP00000006434 | Pre-B-cell leukemia homeobox 2. | Homeobox B1a. | 0.710 |
LOC109512200 | hoxb1 | ENSHCOP00000008202 | ENSHCOP00000018890 | Pre-B-cell leukemia homeobox 2. | Homeobox B1b. | 0.799 |
LOC109512200 | pknox2 | ENSHCOP00000008202 | ENSHCOP00000021080 | Pre-B-cell leukemia homeobox 2. | Pbx/knotted 1 homeobox 2. | 0.588 |
LOC109514703 | pknox2 | ENSHCOP00000015228 | ENSHCOP00000021080 | Mothers against decapentaplegic homolog. | Pbx/knotted 1 homeobox 2. | 0.414 |
LOC109521169 | LOC109508573 | ENSHCOP00000002769 | ENSHCOP00000006434 | Pre-B-cell leukemia homeobox 1b. | Homeobox B1a. | 0.694 |
LOC109521169 | hoxb1 | ENSHCOP00000002769 | ENSHCOP00000018890 | Pre-B-cell leukemia homeobox 1b. | Homeobox B1b. | 0.696 |
LOC109521169 | pknox2 | ENSHCOP00000002769 | ENSHCOP00000021080 | Pre-B-cell leukemia homeobox 1b. | Pbx/knotted 1 homeobox 2. | 0.588 |
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