STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109526801Dynein light chain. (89 aa)    
Predicted Functional Partners:
nup214
Nup214_FG domain-containing protein.
    
 
 0.899
wdr60
WD repeat domain 60.
    
 0.883
Dync1i1
Uncharacterized protein.
   
 0.833
dync1i2
Dynein, cytoplasmic 1, intermediate chain 2a.
   
 0.833
DYNC1I1
Uncharacterized protein.
   
 0.833
LOC109531624
WD_REPEATS_REGION domain-containing protein.
   
 0.833
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.820
wdr34
WD repeat domain 34.
    
 0.811
LOC109526764
Dynein light chain roadblock.
   
 0.807
dynlrb2
Robl_LC7 domain-containing protein.
   
 0.807
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.