STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109523134Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins. (882 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.997
LOC109513623
Uncharacterized protein.
   
 0.980
LOC109527442
Junction plakoglobin a.
   
 0.926
LOC109529128
Uncharacterized protein.
   
 0.926
ENSHCOP00000002886
Matrix metallopeptidase 9.
     
 0.818
CTNND1
Catenin delta 1.
    
 0.801
ARVCF
ARVCF delta catenin family member b.
    
 0.801
LOC109527330
Catenin (cadherin-associated protein), delta 1.
    
 0.801
LOC109512344
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
     
0.759
ENSHCOP00000007535
Uncharacterized protein.
    
 
 0.735
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.