STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdm7aLysine (K)-specific demethylase 7Ab. (831 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.703
suv39h1
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.664
LOC109511586
Lysine (K)-specific demethylase 2Ba.
 
 
 
  0.575
ENSHCOP00000017001
Lysine (K)-specific demethylase 2Bb.
 
 
 
  0.560
topbp1
DNA topoisomerase II binding protein 1.
    
   0.551
rnf2
Ring finger protein 2.
   
 
 0.536
ENSHCOP00000001779
Histone H3; Belongs to the histone H3 family.
    
 0.531
ENSHCOP00000011640
Histone H3; Belongs to the histone H3 family.
    
 0.531
LOC109530200
Histone H3; Belongs to the histone H3 family.
    
 0.531
ENSHCOP00000013225
Histone H3; Belongs to the histone H3 family.
    
 0.531
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.