STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109516891Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1732 aa)    
Predicted Functional Partners:
arhgap1
Rho GTPase activating protein 1.
     
0.868
ENSHCOP00000001889
Ras homolog gene family, member Gd.
   
 0.698
LOC109512466
Ras homolog family member Gb.
   
 0.698
CDC42
Cell division cycle 42.
    
 0.695
LOC109521595
Uncharacterized protein.
    
 0.695
rhof
Ras homolog family member F.
    
 0.694
LOC109528419
Ras homolog gene family, member Aa.
    
 0.694
rhoh
Ras homolog family member H.
    
 0.694
rhov
Ras homolog family member V.
    
 0.694
LOC109522387
Uncharacterized protein.
    
 0.694
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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