STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109522239Vitamin D receptor b. (409 aa)    
Predicted Functional Partners:
ncor2
Nuclear receptor corepressor 2.
    
 0.739
ncor1
Nuclear receptor corepressor 1.
    
 0.739
ncoa1
Nuclear receptor coactivator 1.
    
 0.731
ENSHCOP00000006319
Nuclear receptor coactivator 2.
    
 0.730
LOC109518905
Uncharacterized protein.
    
 0.730
NCOA3
Nuclear receptor coactivator 3.
    
 0.730
LOC109521541
Nuclear receptor coactivator 3.
    
 0.730
Ncoa2
Uncharacterized protein.
    
 0.730
LOC109517612
Uncharacterized protein.
   
0.700
LOC109530282
Retinoid X receptor, alpha a.
   
0.700
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.