STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqceUncharacterized protein. (670 aa)    
Predicted Functional Partners:
efcab7
EF-hand calcium binding domain 7.
   
 0.893
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.860
evc2
EvC ciliary complex subunit 2.
     
 0.724
ttc34
Tetratricopeptide repeat domain 34.
   
  
 0.610
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.594
dlg5
Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family.
     
 0.570
ASF1B
Anti-silencing function 1Bb histone chaperone.
    
 0.561
LOC109523313
RAN binding protein 2.
   
 
 0.550
gle1
GLE1 RNA export mediator.
    
 0.530
LOC109519359
BAH domain and coiled-coil containing 1a.
      
 0.483
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.