STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109507833Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
micu2
Mitochondrial calcium uptake 2.
      
 0.696
micu1
Mitochondrial calcium uptake 1.
      
 0.696
micu3
Mitochondrial calcium uptake family, member 3a.
      
 0.692
ENSHCOP00000020084
Single-pass membrane protein with aspartate-rich tail 1a.
      
 0.566
smdt1
Uncharacterized protein.
      
 0.566
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 
 0.430
mcu
Mitochondrial calcium uniporter.
    
 
 0.430
fam32a
Family with sequence similarity 32 member A.
   
  
 0.420
trmt1
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.407
aldh4a1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.405
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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