STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sra1SRA1 domain-containing protein. (225 aa)    
Predicted Functional Partners:
pus1
Pseudouridine synthase 1.
      
 0.574
LOC109508324
Matrin 3-like 1.1.
      
 0.524
Dcp1a
mRNA_decap_C domain-containing protein.
      
 0.471
ENSHCOP00000018249
Uncharacterized protein.
      
 0.471
LOC109528033
D site albumin promoter binding protein a.
    
 
 0.413
LOC109515392
D site albumin promoter binding protein b.
    
 
 0.413
sharpin
SHANK-associated RH domain interacting protein.
      
 0.407
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.