Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109520348 | TINAGL1 | ENSHCOP00000003403 | ENSHCOP00000024099 | Galactose-3-O-sulfotransferase 4. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.405 |
TINAGL1 | LOC109520348 | ENSHCOP00000024099 | ENSHCOP00000003403 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Galactose-3-O-sulfotransferase 4. | 0.405 |
TINAGL1 | agrn | ENSHCOP00000024099 | ENSHCOP00000002641 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Agrin. | 0.420 |
TINAGL1 | fam83b | ENSHCOP00000024099 | ENSHCOP00000012593 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Family with sequence similarity 83 member B. | 0.543 |
TINAGL1 | hspg2 | ENSHCOP00000024099 | ENSHCOP00000021217 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Heparan sulfate proteoglycan 2. | 0.508 |
TINAGL1 | mrm1 | ENSHCOP00000024099 | ENSHCOP00000018820 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). | 0.407 |
TINAGL1 | pef1 | ENSHCOP00000024099 | ENSHCOP00000019454 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Penta-EF-hand domain containing 1. | 0.510 |
TINAGL1 | prdx3 | ENSHCOP00000024099 | ENSHCOP00000019755 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Peroxiredoxin 3. | 0.404 |
TINAGL1 | tmem59 | ENSHCOP00000024099 | ENSHCOP00000017926 | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | Transmembrane protein 59. | 0.407 |
agrn | TINAGL1 | ENSHCOP00000002641 | ENSHCOP00000024099 | Agrin. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.420 |
agrn | hspg2 | ENSHCOP00000002641 | ENSHCOP00000021217 | Agrin. | Heparan sulfate proteoglycan 2. | 0.718 |
fam83b | TINAGL1 | ENSHCOP00000012593 | ENSHCOP00000024099 | Family with sequence similarity 83 member B. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.543 |
fam83b | pef1 | ENSHCOP00000012593 | ENSHCOP00000019454 | Family with sequence similarity 83 member B. | Penta-EF-hand domain containing 1. | 0.471 |
hspg2 | TINAGL1 | ENSHCOP00000021217 | ENSHCOP00000024099 | Heparan sulfate proteoglycan 2. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.508 |
hspg2 | agrn | ENSHCOP00000021217 | ENSHCOP00000002641 | Heparan sulfate proteoglycan 2. | Agrin. | 0.718 |
mrm1 | TINAGL1 | ENSHCOP00000018820 | ENSHCOP00000024099 | Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.407 |
pef1 | TINAGL1 | ENSHCOP00000019454 | ENSHCOP00000024099 | Penta-EF-hand domain containing 1. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.510 |
pef1 | fam83b | ENSHCOP00000019454 | ENSHCOP00000012593 | Penta-EF-hand domain containing 1. | Family with sequence similarity 83 member B. | 0.471 |
prdx3 | TINAGL1 | ENSHCOP00000019755 | ENSHCOP00000024099 | Peroxiredoxin 3. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.404 |
tmem59 | TINAGL1 | ENSHCOP00000017926 | ENSHCOP00000024099 | Transmembrane protein 59. | Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. | 0.407 |