Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acod1 | ergic1 | ENSHCOP00000007015 | ENSHCOP00000003516 | Aconitate decarboxylase 1. | Endoplasmic reticulum-golgi intermediate compartment 1. | 0.494 |
acod1 | ergic2 | ENSHCOP00000007015 | ENSHCOP00000008980 | Aconitate decarboxylase 1. | ERGIC and golgi 2. | 0.485 |
acod1 | ergic3 | ENSHCOP00000007015 | ENSHCOP00000024834 | Aconitate decarboxylase 1. | ERGIC and golgi 3. | 0.485 |
acod1 | gtpbp3 | ENSHCOP00000007015 | ENSHCOP00000005821 | Aconitate decarboxylase 1. | GTP binding protein 3, mitochondrial. | 0.755 |
acod1 | mto1 | ENSHCOP00000007015 | ENSHCOP00000014189 | Aconitate decarboxylase 1. | Mitochondrial tRNA translation optimization 1. | 0.484 |
acod1 | trmu | ENSHCOP00000007015 | ENSHCOP00000024275 | Aconitate decarboxylase 1. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.778 |
acod1 | yars1 | ENSHCOP00000007015 | ENSHCOP00000005068 | Aconitate decarboxylase 1. | Tyrosine--tRNA ligase. | 0.401 |
asl | trmu | ENSHCOP00000021900 | ENSHCOP00000024275 | Argininosuccinate lyase. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.867 |
asl | yars1 | ENSHCOP00000021900 | ENSHCOP00000005068 | Argininosuccinate lyase. | Tyrosine--tRNA ligase. | 0.554 |
dao | ergic1 | ENSHCOP00000007432 | ENSHCOP00000003516 | D-amino-acid oxidase, tandem duplicate 2. | Endoplasmic reticulum-golgi intermediate compartment 1. | 0.484 |
dao | ergic2 | ENSHCOP00000007432 | ENSHCOP00000008980 | D-amino-acid oxidase, tandem duplicate 2. | ERGIC and golgi 2. | 0.484 |
dao | ergic3 | ENSHCOP00000007432 | ENSHCOP00000024834 | D-amino-acid oxidase, tandem duplicate 2. | ERGIC and golgi 3. | 0.484 |
dao | gtpbp3 | ENSHCOP00000007432 | ENSHCOP00000005821 | D-amino-acid oxidase, tandem duplicate 2. | GTP binding protein 3, mitochondrial. | 0.755 |
dao | mto1 | ENSHCOP00000007432 | ENSHCOP00000014189 | D-amino-acid oxidase, tandem duplicate 2. | Mitochondrial tRNA translation optimization 1. | 0.484 |
dao | trmu | ENSHCOP00000007432 | ENSHCOP00000024275 | D-amino-acid oxidase, tandem duplicate 2. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.778 |
dao | yars1 | ENSHCOP00000007432 | ENSHCOP00000005068 | D-amino-acid oxidase, tandem duplicate 2. | Tyrosine--tRNA ligase. | 0.401 |
ergic1 | acod1 | ENSHCOP00000003516 | ENSHCOP00000007015 | Endoplasmic reticulum-golgi intermediate compartment 1. | Aconitate decarboxylase 1. | 0.494 |
ergic1 | dao | ENSHCOP00000003516 | ENSHCOP00000007432 | Endoplasmic reticulum-golgi intermediate compartment 1. | D-amino-acid oxidase, tandem duplicate 2. | 0.484 |
ergic1 | gtpbp3 | ENSHCOP00000003516 | ENSHCOP00000005821 | Endoplasmic reticulum-golgi intermediate compartment 1. | GTP binding protein 3, mitochondrial. | 0.962 |
ergic1 | trmu | ENSHCOP00000003516 | ENSHCOP00000024275 | Endoplasmic reticulum-golgi intermediate compartment 1. | tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase. | 0.833 |
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