STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pltpPhospholipid transfer protein. (572 aa)    
Predicted Functional Partners:
LOC109531656
Uncharacterized protein.
   
 0.758
ENSHCOP00000021350
Uncharacterized protein.
   
 0.758
apoa4
Uncharacterized protein.
   
 0.725
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
   
  
 0.691
txnip
Thioredoxin interacting protein.
   
  
 0.596
LOC109514711
Unc-5 netrin receptor C.
      
 0.565
unc5c
Uncharacterized protein.
      
 0.565
ENSHCOP00000002679
Uncharacterized protein.
     
 0.525
apof
Apolipoprotein F.
     
 0.525
lcat
Lecithin-cholesterol acyltransferase.
   
  
 0.523
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.