STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
id2Inhibitor of DNA binding 2a. (142 aa)    
Predicted Functional Partners:
id3
Inhibitor of DNA binding 3.
  
0.939
id1
Inhibitor of DNA binding 1, HLH protein.
  
  
0.926
LOC109507402
Transcription factor 3a.
    
 
 0.619
tcf12
Transcription factor 12.
    
 
 0.619
LOC109507481
BHLH domain-containing protein.
    
 
 0.619
LOC109532234
Transcription factor 3b.
    
 
 0.619
TCF4
Transcription factor 4.
    
 
 0.619
myog
Myogenin.
    
 
 0.578
egr2
Early growth response 2b.
    
 0.467
nkx2-5
NK2 homeobox 5.
    
 
 0.437
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.