rnf20 protein (Hippocampus comes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rnf20

E3 ubiquitin protein ligase. (941 aa)

Predicted Functional Partners:

leo1

0.979

ube2b

0.862

ube2a

0.862

LOC109524680

0.862

cdc73

0.830

paf1

0.806

ENSHCOP00000012013

0.785

LOC109530187

0.756

ctr9

0.752

LOC109520609

0.744

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000012013	LOC109520609	ENSHCOP00000012013	ENSHCOP00000001226	Uncharacterized protein.	WW domain-containing protein.	0.433
ENSHCOP00000012013	LOC109530187	ENSHCOP00000012013	ENSHCOP00000025047	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.785
ENSHCOP00000012013	cdc73	ENSHCOP00000012013	ENSHCOP00000002843	Uncharacterized protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.619
ENSHCOP00000012013	ctr9	ENSHCOP00000012013	ENSHCOP00000001522	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.722
ENSHCOP00000012013	leo1	ENSHCOP00000012013	ENSHCOP00000017561	Uncharacterized protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.740
ENSHCOP00000012013	paf1	ENSHCOP00000012013	ENSHCOP00000017566	Uncharacterized protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.578
ENSHCOP00000012013	rnf20	ENSHCOP00000012013	ENSHCOP00000026044	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.785
LOC109520609	ENSHCOP00000012013	ENSHCOP00000001226	ENSHCOP00000012013	WW domain-containing protein.	Uncharacterized protein.	0.433
LOC109520609	LOC109524680	ENSHCOP00000001226	ENSHCOP00000024300	WW domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.448
LOC109520609	LOC109530187	ENSHCOP00000001226	ENSHCOP00000025047	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.744
LOC109520609	cdc73	ENSHCOP00000001226	ENSHCOP00000002843	WW domain-containing protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.582
LOC109520609	ctr9	ENSHCOP00000001226	ENSHCOP00000001522	WW domain-containing protein.	TPR_REGION domain-containing protein.	0.584
LOC109520609	leo1	ENSHCOP00000001226	ENSHCOP00000017561	WW domain-containing protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.942
LOC109520609	paf1	ENSHCOP00000001226	ENSHCOP00000017566	WW domain-containing protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.622
LOC109520609	rnf20	ENSHCOP00000001226	ENSHCOP00000026044	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.744
LOC109520609	ube2a	ENSHCOP00000001226	ENSHCOP00000013849	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.448
LOC109520609	ube2b	ENSHCOP00000001226	ENSHCOP00000006296	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.448
LOC109524680	LOC109520609	ENSHCOP00000024300	ENSHCOP00000001226	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	WW domain-containing protein.	0.448
LOC109524680	LOC109530187	ENSHCOP00000024300	ENSHCOP00000025047	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin protein ligase.	0.862
LOC109524680	cdc73	ENSHCOP00000024300	ENSHCOP00000002843	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.654