Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Galc | LOC109517454 | ENSHCOP00000025824 | ENSHCOP00000026515 | Galactosylceramidase b. | Phospholipid phosphatase 2a. | 0.915 |
Galc | LOC109528680 | ENSHCOP00000025824 | ENSHCOP00000022070 | Galactosylceramidase b. | Uncharacterized protein. | 0.907 |
Galc | cers6 | ENSHCOP00000025824 | ENSHCOP00000020491 | Galactosylceramidase b. | Ceramide synthase 6. | 0.907 |
LOC109517454 | Galc | ENSHCOP00000026515 | ENSHCOP00000025824 | Phospholipid phosphatase 2a. | Galactosylceramidase b. | 0.915 |
LOC109517454 | LOC109523684 | ENSHCOP00000026515 | ENSHCOP00000005772 | Phospholipid phosphatase 2a. | Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.924 |
LOC109517454 | LOC109528680 | ENSHCOP00000026515 | ENSHCOP00000022070 | Phospholipid phosphatase 2a. | Uncharacterized protein. | 0.915 |
LOC109517454 | SPHK1 | ENSHCOP00000026515 | ENSHCOP00000015187 | Phospholipid phosphatase 2a. | Sphingosine kinase 1. | 0.919 |
LOC109517454 | Sphk2 | ENSHCOP00000026515 | ENSHCOP00000003722 | Phospholipid phosphatase 2a. | Sphingosine kinase 2. | 0.919 |
LOC109517454 | acer3 | ENSHCOP00000026515 | ENSHCOP00000010642 | Phospholipid phosphatase 2a. | Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. | 0.934 |
LOC109517454 | cept1 | ENSHCOP00000026515 | ENSHCOP00000010116 | Phospholipid phosphatase 2a. | Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.923 |
LOC109517454 | cers6 | ENSHCOP00000026515 | ENSHCOP00000020491 | Phospholipid phosphatase 2a. | Ceramide synthase 6. | 0.915 |
LOC109517454 | kdsr | ENSHCOP00000026515 | ENSHCOP00000002460 | Phospholipid phosphatase 2a. | 3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.925 |
LOC109517454 | sgpl1 | ENSHCOP00000026515 | ENSHCOP00000003579 | Phospholipid phosphatase 2a. | Sphingosine-1-phosphate lyase 1. | 0.934 |
LOC109523684 | LOC109517454 | ENSHCOP00000005772 | ENSHCOP00000026515 | Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phospholipid phosphatase 2a. | 0.924 |
LOC109523684 | cept1 | ENSHCOP00000005772 | ENSHCOP00000010116 | Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.901 |
LOC109528680 | Galc | ENSHCOP00000022070 | ENSHCOP00000025824 | Uncharacterized protein. | Galactosylceramidase b. | 0.907 |
LOC109528680 | LOC109517454 | ENSHCOP00000022070 | ENSHCOP00000026515 | Uncharacterized protein. | Phospholipid phosphatase 2a. | 0.915 |
LOC109528680 | SPHK1 | ENSHCOP00000022070 | ENSHCOP00000015187 | Uncharacterized protein. | Sphingosine kinase 1. | 0.914 |
LOC109528680 | Sphk2 | ENSHCOP00000022070 | ENSHCOP00000003722 | Uncharacterized protein. | Sphingosine kinase 2. | 0.914 |
LOC109528680 | cers6 | ENSHCOP00000022070 | ENSHCOP00000020491 | Uncharacterized protein. | Ceramide synthase 6. | 0.902 |
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