Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ankrd9 | LOC109521999 | ENSHCOP00000017223 | ENSHCOP00000027451 | ANK_REP_REGION domain-containing protein. | Coiled-coil domain containing 181. | 0.586 |
Ankrd9 | rassf3 | ENSHCOP00000017223 | ENSHCOP00000002514 | ANK_REP_REGION domain-containing protein. | Ras association domain family member 3. | 0.407 |
Ankrd9 | rpl37 | ENSHCOP00000017223 | ENSHCOP00000002112 | ANK_REP_REGION domain-containing protein. | Ribosomal protein L37; Binds to the 23S rRNA. | 0.480 |
Ankrd9 | znf706 | ENSHCOP00000017223 | ENSHCOP00000002146 | ANK_REP_REGION domain-containing protein. | Zinc finger protein 706. | 0.566 |
Cenpv | LOC109521999 | ENSHCOP00000007736 | ENSHCOP00000027451 | Centromere protein V. | Coiled-coil domain containing 181. | 0.526 |
LOC109521999 | Ankrd9 | ENSHCOP00000027451 | ENSHCOP00000017223 | Coiled-coil domain containing 181. | ANK_REP_REGION domain-containing protein. | 0.586 |
LOC109521999 | Cenpv | ENSHCOP00000027451 | ENSHCOP00000007736 | Coiled-coil domain containing 181. | Centromere protein V. | 0.526 |
LOC109521999 | cunh1orf112 | ENSHCOP00000027451 | ENSHCOP00000015625 | Coiled-coil domain containing 181. | Si:dkey-97o5.1. | 0.471 |
LOC109521999 | hook2 | ENSHCOP00000027451 | ENSHCOP00000007337 | Coiled-coil domain containing 181. | Hook microtubule-tethering protein 2. | 0.595 |
LOC109521999 | mrpl30 | ENSHCOP00000027451 | ENSHCOP00000002527 | Coiled-coil domain containing 181. | Mitochondrial ribosomal protein L30. | 0.691 |
LOC109521999 | rassf3 | ENSHCOP00000027451 | ENSHCOP00000002514 | Coiled-coil domain containing 181. | Ras association domain family member 3. | 0.528 |
LOC109521999 | rpl37 | ENSHCOP00000027451 | ENSHCOP00000002112 | Coiled-coil domain containing 181. | Ribosomal protein L37; Binds to the 23S rRNA. | 0.418 |
LOC109521999 | sdhaf2 | ENSHCOP00000027451 | ENSHCOP00000006823 | Coiled-coil domain containing 181. | Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer. | 0.519 |
LOC109521999 | znf706 | ENSHCOP00000027451 | ENSHCOP00000002146 | Coiled-coil domain containing 181. | Zinc finger protein 706. | 0.471 |
cunh1orf112 | LOC109521999 | ENSHCOP00000015625 | ENSHCOP00000027451 | Si:dkey-97o5.1. | Coiled-coil domain containing 181. | 0.471 |
hook2 | LOC109521999 | ENSHCOP00000007337 | ENSHCOP00000027451 | Hook microtubule-tethering protein 2. | Coiled-coil domain containing 181. | 0.595 |
mrpl30 | LOC109521999 | ENSHCOP00000002527 | ENSHCOP00000027451 | Mitochondrial ribosomal protein L30. | Coiled-coil domain containing 181. | 0.691 |
rassf3 | Ankrd9 | ENSHCOP00000002514 | ENSHCOP00000017223 | Ras association domain family member 3. | ANK_REP_REGION domain-containing protein. | 0.407 |
rassf3 | LOC109521999 | ENSHCOP00000002514 | ENSHCOP00000027451 | Ras association domain family member 3. | Coiled-coil domain containing 181. | 0.528 |
rassf3 | znf706 | ENSHCOP00000002514 | ENSHCOP00000002146 | Ras association domain family member 3. | Zinc finger protein 706. | 0.407 |
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