STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109526637Uncharacterized protein. (550 aa)    
Predicted Functional Partners:
akap1
A kinase (PRKA) anchor protein 1b.
      
 0.548
dact3
Uncharacterized protein.
  
     0.481
ENSHCOP00000005704
Uncharacterized protein.
  
     0.449
nck1
Cytoplasmic protein.
    
 
 0.429
nck2
NCK adaptor protein 2a.
    
 
 0.429
ZBTB45
Uncharacterized protein.
  
     0.426
pbxip1
Pre-B-cell leukemia homeobox interacting protein 1b.
  
     0.408
LOC109524113
Uncharacterized protein.
  
     0.403
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.