STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRAG1PEAK1 related, kinase-activating pseudokinase 1. (1331 aa)    
Predicted Functional Partners:
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.688
ENSHCOP00000009027
SH3 domain-containing protein.
     
 0.628
ENSHCOP00000009056
Uncharacterized protein.
     
 0.628
ENSHCOP00000023126
Uncharacterized protein.
     
 0.628
ENSHCOP00000027446
Uncharacterized protein.
     
 0.628
ENSHCOP00000027460
Uncharacterized protein.
     
 0.628
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
      
 0.585
setbp1
SET binding protein 1.
  
    0.514
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.497
LOC109510226
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
   
 0.495
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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