STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109529224Coiled-coil domain containing 114. (460 aa)    
Predicted Functional Partners:
ccdc151
Coiled-coil domain containing 151.
  
 0.893
armc4
Armadillo repeat containing 4.
   
 
 0.842
ENSHCOP00000003598
TPR_REGION domain-containing protein.
   
 
 0.759
ENSHCOP00000003602
annotation not available
   
 
 0.759
LOC109516961
Radial spoke head component 4A.
   
  
 0.759
tekt3
Tektin 3.
   
 
 0.750
drc3
Dynein regulatory complex subunit 3.
   
 
 0.734
LOC109515555
Armadillo repeat containing 3.
   
 
 0.714
ENSHCOP00000010644
Uncharacterized protein.
   
 
 0.712
ribc1
RIB43A domain with coiled-coils 1.
   
 
 0.712
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.