STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryzl1Crystallin, zeta (quinone reductase)-like 1. (303 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.868
urb1
URB1 ribosome biogenesis homolog.
      
 0.680
ENSHCOP00000004912
Xylulokinase homolog (H. influenzae).
     
 0.647
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
   
  
 0.628
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.605
cryl1
Crystallin, lambda 1.
  
  
 0.588
crym
Crystallin, mu.
   
  
 0.587
TMEM196
Transmembrane protein 196.
      
 0.584
tmem242
Transmembrane protein 242.
      
 0.579
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
   0.577
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.