ENSHCOP00000028073 protein (Hippocampus comes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSHCOP00000028073

Uncharacterized protein. (563 aa)

Predicted Functional Partners:

ENSHCOP00000023803

0.436

mysm1

0.432

LOC109527790

0.417

LOC109509704

0.417

Your Current Organism:

Hippocampus comes

NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSHCOP00000023803	ENSHCOP00000028073	ENSHCOP00000023803	ENSHCOP00000028073	Uncharacterized protein.	Uncharacterized protein.	0.436
ENSHCOP00000023803	mysm1	ENSHCOP00000023803	ENSHCOP00000026320	Uncharacterized protein.	Myb-like, SWIRM and MPN domains 1.	0.758
ENSHCOP00000028073	ENSHCOP00000023803	ENSHCOP00000028073	ENSHCOP00000023803	Uncharacterized protein.	Uncharacterized protein.	0.436
ENSHCOP00000028073	LOC109509704	ENSHCOP00000028073	ENSHCOP00000026807	Uncharacterized protein.	Arachidonate 12-lipoxygenase, 12S-type-like.	0.417
ENSHCOP00000028073	LOC109527790	ENSHCOP00000028073	ENSHCOP00000016772	Uncharacterized protein.	Lipoxygenase domain-containing protein.	0.417
ENSHCOP00000028073	mysm1	ENSHCOP00000028073	ENSHCOP00000026320	Uncharacterized protein.	Myb-like, SWIRM and MPN domains 1.	0.432
LOC109509704	ENSHCOP00000028073	ENSHCOP00000026807	ENSHCOP00000028073	Arachidonate 12-lipoxygenase, 12S-type-like.	Uncharacterized protein.	0.417
LOC109527790	ENSHCOP00000028073	ENSHCOP00000016772	ENSHCOP00000028073	Lipoxygenase domain-containing protein.	Uncharacterized protein.	0.417
mysm1	ENSHCOP00000023803	ENSHCOP00000026320	ENSHCOP00000023803	Myb-like, SWIRM and MPN domains 1.	Uncharacterized protein.	0.758
mysm1	ENSHCOP00000028073	ENSHCOP00000026320	ENSHCOP00000028073	Myb-like, SWIRM and MPN domains 1.	Uncharacterized protein.	0.432