STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109525260Uncharacterized protein. (729 aa)    
Predicted Functional Partners:
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
     
  0.650
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
     
  0.650
LOC109527095
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.
     
  0.650
LOC109529005
PIPK domain-containing protein.
     
  0.650
LOC109514150
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
     
  0.650
LOC109523146
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
     
  0.650
LOC109522364
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
     
  0.650
cog8
Component of oligomeric golgi complex 8.
    
 
 0.612
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.608
cog3
Component of oligomeric golgi complex 3.
    
 
 0.587
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.