STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap5Rho GTPase activating protein 5. (1494 aa)    
Predicted Functional Partners:
LOC109528419
Ras homolog gene family, member Aa.
    
 0.964
LOC109522387
Uncharacterized protein.
    
 0.964
LOC109511764
Uncharacterized protein.
    
 0.964
LOC109531368
Uncharacterized protein.
    
 0.964
src
Tyrosine-protein kinase.
    
 0.926
LOC109513573
Tyrosine-protein kinase.
    
 0.926
LOC109512524
Rho GTPase activating protein 35b.
  
  
 
0.901
arhgap35
Uncharacterized protein.
  
  
 
0.901
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.882
LOC109507788
Uncharacterized protein.
    
 0.663
Your Current Organism:
Hippocampus comes
NCBI taxonomy Id: 109280
Other names: H. comes, tiger tail seahorse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.