STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZPJ3TIR domain-containing protein. (191 aa)    
Predicted Functional Partners:
A0A0D3CCJ3
SUN domain-containing protein.
    
 
 0.609
A0A0D3ADK2
SUN domain-containing protein.
    
 
 0.603
A0A0D3AEL8
SUN domain-containing protein.
    
 
 0.598
A0A0D3E018
Uncharacterized protein.
      
 0.587
A0A0D3CXC6
SUN domain-containing protein.
    
 
 0.562
A0A0D3CZU2
SUN domain-containing protein.
    
 
 0.562
A0A0D3CMH3
Uncharacterized protein.
      
 0.539
A0A0D3EG86
Uncharacterized protein.
      
 0.538
A0A0D3A2V8
Uncharacterized protein.
      
 0.489
A0A0D3BM03
Uncharacterized protein.
      
 0.489
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: medium (44%) [HD]