STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZPV4Carboxypeptidase; Belongs to the peptidase S10 family. (489 aa)    
Predicted Functional Partners:
A0A0D3DZL0
Uncharacterized protein; Belongs to the peptidase S8 family.
      
 0.575
A0A0D3CZM1
F-box domain-containing protein.
    
 
 0.573
A0A0D3A702
Uncharacterized protein.
      
 0.553
A0A0D3BZ49
Uncharacterized protein.
      
 0.553
A0A0D3CR08
Uncharacterized protein.
      
 0.553
A0A0D3E0G2
Uncharacterized protein.
      
 0.553
A0A0D3BML9
Uncharacterized protein.
    
 
 0.532
A0A0D2ZW89
Uncharacterized protein.
      
 0.530
A0A0D3B0N6
Uncharacterized protein.
      
 0.529
A0A0D3C4W5
Uncharacterized protein.
      
 0.529
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.