STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZPV6Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
A0A0D3C7D6
RING-type domain-containing protein.
    
 0.900
A0A0D3D8W1
RING-type domain-containing protein.
    
 0.900
A0A0D3E6F6
RING-type domain-containing protein.
    
 0.900
A0A0D3AZK0
Rhodanese domain-containing protein.
    
 0.726
A0A0D3B563
E2F_TDP domain-containing protein.
    
 0.597
A0A0D3BRP2
E2F_TDP domain-containing protein.
    
 0.597
A0A0D3C4H5
E2F_CC-MB domain-containing protein.
    
 0.597
A0A0D3DJW7
E2F_TDP domain-containing protein.
    
 0.597
A0A0D2ZSI5
WD_REPEATS_REGION domain-containing protein.
    
 0.585
A0A0D3AC09
WD_REPEATS_REGION domain-containing protein.
    
 0.585
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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