STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZQU9Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
A0A0D3DYD3
Uncharacterized protein.
    
 0.616
A0A0D3C0X0
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.602
A0A0D3AFY0
Uncharacterized protein.
   
 0.597
A0A0D3C1T0
Uncharacterized protein.
   
 0.597
A0A0D3CGD9
Uncharacterized protein.
    
 0.545
A0A0D3BDZ0
DNA helicase; Belongs to the MCM family.
   
 0.499
A0A0D2ZS88
MCM domain-containing protein; Belongs to the MCM family.
   
 0.497
A0A0D3BDI0
DNA helicase; Belongs to the MCM family.
   
 0.497
A0A0D3DBX2
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
   0.491
A0A0D3E2R6
Uncharacterized protein.
   
 0.475
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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