STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZTV2Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A0D3ALZ9
Peptidylprolyl isomerase.
  
  
 0.555
A0A0D3EB96
Uncharacterized protein.
  
  
 0.555
A0A0D3EB97
Uncharacterized protein.
  
  
 0.555
A0A0D3AYN9
Peptidylprolyl isomerase.
   
 
 0.539
A0A0D3BF50
Peptidylprolyl isomerase.
   
 
 0.539
A0A0D3DAN7
Peptidylprolyl isomerase.
   
 
 0.539
A0A0D3E255
Peptidylprolyl isomerase.
   
 
 0.539
A0A0D3CWT4
Uncharacterized protein.
   
 
 0.535
A0A0D3D0G7
Uncharacterized protein.
   
 
 0.535
A0A0D3D5L6
Uncharacterized protein.
     
 0.510
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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