STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZW80Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
A0A0D3AUF8
Uncharacterized protein.
    
 
 0.801
A0A0D3D9D5
Uncharacterized protein.
    
 
 0.801
A0A0D3AQW7
Uncharacterized protein.
    
 
 0.699
A0A0D3CWE7
Uncharacterized protein.
    
 
 0.699
A0A0D3D0Z7
Uncharacterized protein.
    
 
 0.699
A0A0D3EH61
Oleosin.
  
     0.540
A0A0D3DDN6
Uncharacterized protein.
  
     0.538
A0A0D3B4K8
Uncharacterized protein.
  
 
   0.537
A0A0D3A0P4
Uncharacterized protein.
  
     0.535
A0A0D3BU59
Terpene_synth domain-containing protein.
  
     0.532
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.