STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZWN9Hydrolase_4 domain-containing protein. (125 aa)    
Predicted Functional Partners:
A0A0D3BZF8
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 
 0.827
A0A0D3BEL0
Uncharacterized protein.
   
   0.750
A0A0D3E2F2
Uncharacterized protein.
   
   0.750
A0A0D3E3M6
Epimerase domain-containing protein.
  
   0.723
A0A0D3CN48
zf-CHCC domain-containing protein.
   
   0.714
A0A0D3AI81
NADH_4Fe-4S domain-containing protein.
   
 
 0.706
A0A0D3B0B3
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.706
A0A0D3EGU2
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.706
A0A0D3EGN3
Uncharacterized protein.
    
   0.686
A0A0D2ZQ97
CHCH domain-containing protein.
   
 
 0.680
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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