STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZX41ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family. (97 aa)    
Predicted Functional Partners:
A0A0D3DYI1
Ribosomal_L16 domain-containing protein.
  
 0.990
A0A0D2ZT84
Uncharacterized protein.
  
 0.984
A0A0D2ZT37
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
  
 0.982
A0A0D3ASN3
Uncharacterized protein.
  
 0.980
A0A0D3B8H2
Uncharacterized protein.
  
 0.980
A0A0D3E873
Uncharacterized protein.
  
 0.980
A0A0D3CIT3
MCM domain-containing protein.
  
 0.973
A0A0D3D108
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
  
 0.973
A0A0D3A2K9
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
   
 0.970
A0A0D3BLU4
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
   
 0.970
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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