Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZXB8Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
A0A0D2ZRI5
Uncharacterized protein.
    
  0.597
A0A0D3D2L2
Uncharacterized protein.
    
  0.597
A0A0D3C672
Uncharacterized protein.
  
 
  0.527
A0A0D3DDP4
DUF3490 domain-containing protein.
  
    0.505
A0A0D3B6P1
Uncharacterized protein.
  
 
  0.477
A0A0D3B1V4
FBD domain-containing protein.
  
 
   0.472
A0A0D3B1U6
Uncharacterized protein.
  
 
   0.461
A0A0D3D8B9
LOB domain-containing protein.
  
     0.461
A0A0D3AYV3
LOB domain-containing protein.
  
     0.460
A0A0D3E268
Uncharacterized protein.
  
     0.460
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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