STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZZ30Dimer_Tnp_hAT domain-containing protein. (158 aa)    
Predicted Functional Partners:
A0A0D3DKP5
DUF4371 domain-containing protein.
  
     0.520
A0A0D3APC9
TTF-type domain-containing protein.
  
     0.516
A0A0D3BZS1
Uncharacterized protein.
  
     0.515
A0A0D3BT50
TTF-type domain-containing protein.
  
     0.510
A0A0D3ARM9
Uncharacterized protein.
  
     0.503
A0A0D3BKF9
Uncharacterized protein.
  
     0.501
A0A0D3DAF3
TTF-type domain-containing protein.
  
     0.496
A0A0D3DCN2
TTF-type domain-containing protein.
  
     0.493
A0A0D3CU48
TTF-type domain-containing protein.
  
     0.488
A0A0D2ZYF0
Uncharacterized protein.
  
     0.481
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.