STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ZZ95Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
A0A0D3CDA7
Uncharacterized protein.
  
 
 0.571
A0A0D3A4A2
Uncharacterized protein.
  
 
  0.564
A0A0D3E1L9
Uncharacterized protein.
 
   
 0.555
A0A0D3ECL4
NAC domain-containing protein.
  
 
  0.555
A0A0D3AG27
Uncharacterized protein.
  
    0.551
A0A0D3CZJ2
Uncharacterized protein.
  
 
  0.548
A0A0D2ZWM2
Plastocyanin-like domain-containing protein.
  
    0.547
A0A0D3AGN0
GH16 domain-containing protein.
  
  
 0.547
A0A0D3CZF4
DUF569 domain-containing protein.
  
 
  0.547
A0A0D3C035
Uncharacterized protein.
  
 
   0.546
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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