STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3A230Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
A0A0D3AYS7
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.833
A0A0D3E2S8
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.833
A0A0D3AYM2
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.754
A0A0D3BF78
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.754
A0A0D2ZPU4
SEC7 domain-containing protein.
    
 0.707
A0A0D3C9Y2
SEC7 domain-containing protein.
    
 0.707
A0A0D3CSZ5
SEC7 domain-containing protein.
    
 0.707
A0A0D3EE06
SEC7 domain-containing protein.
    
 0.707
A0A0D3A200
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.700
A0A0D3B813
COP-gamma_platf domain-containing protein.
    
 0.700
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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