STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3A4T8Fn3_6 domain-containing protein. (114 aa)    
Predicted Functional Partners:
A0A0D3B8H6
BRX domain-containing protein.
  
 
 0.566
A0A0D3BU55
BRX domain-containing protein.
  
 
 0.560
A0A0D3CI70
BRX domain-containing protein.
  
 
 0.534
A0A0D2ZTY9
PEROXIDASE_4 domain-containing protein.
  
 
  0.525
A0A0D3B476
Uncharacterized protein.
  
     0.520
A0A0D3AWU2
Uncharacterized protein.
  
     0.517
A0A0D3EFM6
NAC domain-containing protein.
  
  
  0.517
A0A0D3C3C0
Phytocyanin domain-containing protein.
  
  
  0.516
A0A0D3C720
NAC domain-containing protein.
  
  
  0.514
A0A0D3DBR1
Uncharacterized protein.
  
     0.513
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.