STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AAT5Uncharacterized protein. (293 aa)    
Predicted Functional Partners:
A0A0D3E8D6
ERCC4 domain-containing protein.
    
 0.527
A0A0D2ZQB5
Protein kinase domain-containing protein.
   
 0.466
A0A0D3AEG7
Small nuclear ribonucleoprotein G.
    
  0.458
A0A0D3BF94
DNA polymerase.
   
 0.449
A0A0D3CN48
zf-CHCC domain-containing protein.
   
   0.440
A0A0D3BZF8
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
   0.433
A0A0D3E3M6
Epimerase domain-containing protein.
    
   0.428
A0A0D3EGN3
Uncharacterized protein.
    
   0.424
A0A0D3CYG6
DNA ligase.
     
 0.414
A0A0D3ATJ5
DNA_pol_E_B domain-containing protein.
    
 0.400
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.