STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AAV4Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (501 aa)    
Predicted Functional Partners:
A0A0D3A6E1
DUF676 domain-containing protein.
      
 0.569
A0A0D3DW71
Uncharacterized protein; Belongs to the plant dehydrin family.
      
 0.487
A0A0D3EH26
Uncharacterized protein.
      
 0.487
A0A0D3C7E9
Uncharacterized protein; Seed storage protein; Belongs to the 11S seed storage protein (globulins) family.
      
 0.471
A0A0D3AU26
Uncharacterized protein.
      
 0.449
A0A0D3E6F9
Uncharacterized protein.
      
 0.449
A0A0D3BJT5
Uncharacterized protein; Belongs to the NPH3 family.
      
 0.434
A0A0D3DI62
Uncharacterized protein; Belongs to the NPH3 family.
      
 0.434
A0A0D2ZVB6
ALOG domain-containing protein.
      
 0.410
A0A0D3A452
ALOG domain-containing protein.
      
 0.410
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.