STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3AAY5Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
A0A0D3B8Y1
Uncharacterized protein; Belongs to the P(II) protein family.
  
 
 0.983
A0A0D3ACR3
Glutamine synthetase.
  
  
 0.588
A0A0D3AJD2
Glutamine synthetase.
  
  
 0.588
A0A0D3BZ71
Glutamine synthetase.
  
  
 0.588
A0A0D3DL12
Glutamine synthetase.
  
  
 0.588
A0A0D3EF05
Glutamine synthetase.
  
  
 0.588
A0A0D3ANB9
Glutamine synthetase.
  
  
 0.551
A0A0D3ARC1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.512
A0A0D3CW36
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.512
A0A0D3D1F1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  
 0.512
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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