STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D3ACQ7SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (272 aa)    
Predicted Functional Partners:
A0A0D2ZYF8
Uncharacterized protein.
  
 
 0.789
A0A0D3EBK8
Uncharacterized protein.
  
 
 0.789
A0A0D3EBL3
Uncharacterized protein.
  
 
 0.789
A0A0D3EBL4
Uncharacterized protein.
  
 
 0.789
A0A0D3AZ78
Uncharacterized protein.
  
 
 0.724
A0A0D3BP89
Uncharacterized protein.
  
 
 0.724
A0A0D3C746
Uncharacterized protein.
  
 
 0.724
A0A0D3DZA1
Uncharacterized protein.
  
 
 0.724
A0A0D3EBV8
Uncharacterized protein.
  
 
 0.724
A0A0D2ZVU7
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 
 0.687
Your Current Organism:
Brassica oleracea
NCBI taxonomy Id: 109376
Other names: B. oleracea var. oleracea, Brassica oleracea subsp. oleracea, Brassica oleracea var. oleracea
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